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Re:Combine Multiple AWS Instances into a 16-GPU Monster Machine by semi-extrinsic on Thursday March 31, 2016 @05:23PM (#11400652)
Have you done any molecular dynamics benchmarks? If so, what kind/what system? I'd be very interested to see those.

If you haven't, I could probably contribute some strong and weak scaling testcases.

Re:Combine Multiple AWS Instances into a 16-GPU Monster Machine by mtweak on Thursday March 31, 2016 @05:40PM (#11400757)
We've only done cursory evaluation of NAMD scaling. We saw a 7X improvement going from a non-GPU system to remote GPUs located in a different datacenter over shared 10g. We're not sure if that was with a representative dataset (MD is not our skill set), so if you can help us with a case study we'd be excited to work with you. Please do contact me.
Re:Combine Multiple AWS Instances into a 16-GPU Monster Machine by semi-extrinsic on Thursday March 31, 2016 @06:21PM (#11401047)
I sent you a message with some more info and my email via the contact form at bitfusion.io