ldoroud
Re:How to measure DNA similarity with Python
on Wednesday February 26, 2020 @01:20PM (#22425655)
Since you specifically mentioned DNA similarity and not strings in general, I assume you want to align the sequences rather than just the Levenshtein distance between them...
If that is the case, I recommend using Biopython (https://biopython.org/) for alignments. There are modules for pairwise sequence alignments both global and local alignments.
Re:Online Dating in the Bay Area, Gender Ratios by City and Age – Matc...
on Saturday October 13, 2018 @08:25PM (#18210703)
The link seems to be broken?
Re:Useful Perl one-liners (2013)
on Tuesday November 29, 2016 @07:59PM (#13067610)
Not really or at least I haven't had that problem. It would be a problem if they used both \r and \n at the same time. in that case you can always do \r\n to \n or something like that.
Re:Useful Perl one-liners (2013)
on Tuesday November 29, 2016 @07:32PM (#13067462)
My favorite command when dealing with csv/txt files generated by Microsoft products:
perl -p -e 's/\r/\n/g' Bad_Microsoft.csv Good_unix.csv
Re:American Gut Project – Open-source human microbiome analysis
on Monday May 09, 2016 @04:30PM (#11662890)
You can check out http://humanfoodproject.com/americangut/ for more information on what to expect, analysis pipeline and privacy of your data.
Also, there is a very cool TED talk by Rob Knight on gut microbiome:
https://www.ted.com/talks/rob_knight_how_our_microbes_make_u...
Re:Show HN: LogDNA – Easy logging in the cloud
on Wednesday February 10, 2016 @08:18PM (#11077604)
DNA is normally and naturally right-handed which means your logo is wrong!