genemachinery
I can send a model, Python DNA Plotter, of an Oxford nanopore DNA sequencer(MinION), shows what a Mu DNA plotter simulation may look like.
Students can now learn python programming and DNA sequencing in school, using Mu python to simulate MinION. NMSU is using MinION:https://www.youtube.com/watch?v=9tUtC4rcZ3w
MinION, how it works video:https://www.youtube.com/watch?v=GUb1TZvMWsw Python is the most widely used computer language: https://codewith.mu/ https://codewith.mu/en/tutorials/1.0/plotter A cheap $1K sequencer, MinION, models immune response to immunotherapy? https://blogs.rstudio.com/tensorflow/posts/2018-01-29-dl-for...
Can we then create a cheaper CRISPR test? To cassify AS? Could a CRISPR test correlate immune response to TCR/CRISPR? https://www.youtube.com/watch?v=jAhjPd4uNFY What works best (chemo vs other) per immune response DNA?
See Mammoth Bio CRISPR paper test. https://mammoth.bio/ NCGR has trained NHS/UK in DNA diagnostics in this internship. https://www.youtube.com/watch?v=9tUtC4rcZ3w http://www.nminbre.org/index.php/2018-inbre-summer-internshi... I would study Machine Learning as it is now used for DNA. https://github.com/kjaisingh/high-school-guide-to-machine-le... I used AI/shotgun sequencing on the US Human Genome Project.
Many families in NM are broken. When drugs remove women the society breaks down. My wife sees released women inmates and their children living out of cars at Santa Fe Community College. We volunteer at the Santa Fe Interfaith Homeless Shelter with addicts to feed and house them. I worked with AIDS patients in Jamaica, WI in US Peace Corps and alcoholic students in Gallup UNM. AIDS patients suffer brain issues as the disease progresses. I also work training women in IT in summer internships at the State of NM. Many work in NM. I completed a thesis on DNA shotgun sequencing at the US Human Genome Project at Los Alamos National Lab. I graduated with MS CS at NM Tech while at LANL.
My son is now a senior in Chemical/Biomedical engineering at CSU, Fort Collins building Alzheimer's, TBI, and addiction models using neural nets/machine learning. https://www.youtube.com/channel/UCWN3xxRkmTPmbKwht9FuE5A?app... Unfortunately there are no Chemical/Biomedical Engineering BS programs in New Mexico? My son has studied the Chinese language. How do we stop importation of Fentanyl from China? https://www.statnews.com/2018/01/24/china-fentanyl-usps/ Delta FosB protein is seen in epileptics, Traumatic Brain Injury (TBI), addicts and Alzheimer's brains. US football and NHL hockey teams too? https://en.wikipedia.org/wiki/FOSB Could a plastic contact lens absorb Delta FosB? Could Korean contact lens be used to monitor Delta Fosb in addicts? A lower amount could mean effective drug addiction treatment? Could you develop a contact lens sensor for Delta FosB? https://www.usatoday.com/story/news/nation-now/2018/01/25/th...
Delta FosB may be detected in eyes via contact lens? Cheaper than MRI. https://jamanetwork.com/journals/jamaophthalmology/article-a... https://www.ncbi.nlm.nih.gov/pubmed/11006248